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Creators/Authors contains: "Chen, Zhe"

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  1. Free, publicly-accessible full text available December 1, 2025
  2. Free, publicly-accessible full text available January 1, 2026
  3. Abstract Randomization inference is a powerful tool in early phase vaccine trials when estimating the causal effect of a regimen against a placebo or another regimen. Randomization-based inference often focuses on testing either Fisher’s sharp null hypothesis of no treatment effect for any participant or Neyman’s weak null hypothesis of no sample average treatment effect. Many recent efforts have explored conducting exact randomization-based inference for other summaries of the treatment effect profile, for instance, quantiles of the treatment effect distribution function. In this article, we systematically review methods that conduct exact, randomization-based inference for quantiles of individual treatment effects (ITEs) and extend some results to a special case where naïve participants are expected not to exhibit responses to highly specific endpoints. These methods are suitable for completely randomized trials, stratified completely randomized trials, and a matched study comparing two non-randomized arms from possibly different trials. We evaluate the usefulness of these methods using synthetic data in simulation studies. Finally, we apply these methods to HIV Vaccine Trials Network Study 086 (HVTN 086) and HVTN 205 and showcase a wide range of application scenarios of the methods.Rcode that replicates all analyses in this article can be found in first author’s GitHub page athttps://github.com/Zhe-Chen-1999/ITE-Inference. 
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  4. Abstract Silicified microfossils are reported from nine stratigraphic sections of the Ediacaran Doushantuo Formation deposited in shelf margin, slope, and basin environments in Hunan Province of South China. These microfossils include sphaeromorphic and acanthomorphic acritarchs (15 genera and 29 species, including three new acanthomorph species,Bullatosphaera?colliformisn. sp.,Eotylotopalla inflatan. sp., andVerrucosphaera?undulatan. sp.), multicellular algae, tubular microfossils, and other problematic forms, representing major fossil groups similar to those from the Doushantuo Formation in more proximal facies (e.g., inner shelf and shelf lagoon). A database of the abundance and occurrences of Doushantuo acanthomorphs is assembled and analyzed using quantitative and data-visualization methods (e.g., rarefaction analysis, non-parametric multidimensional scaling, and network analysis). The results show that, at the genus and species levels, taxonomic richness of Doushantuo acanthomorphs exhibits considerable variation among facies, but this variation is largely due to sampling and taphonomic biases. The results also show that numerous acanthomorph taxa have broad facies distribution, affirming their biostratigraphic value. The analysis confirms that acanthomorphs in the Weng'an biota of shelf margin facies are composed of a mixture of Member II and Member III assemblages of shelf-lagoon facies in the Yangtze Gorges area. The study shows the biostratigraphic potential of acanthomorphs in the establishment of regional biozones using the first appearance datum of widely distributed taxa, highlighting the importance of continuing exploration of under-sampled Doushantuo sections in slope and basinal facies. UUID:http://zoobank.org/6fc92858-4054-4117-8043-1f06cfe77155 
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    Free, publicly-accessible full text available November 1, 2025
  5. Abstract Polymer materials suffer mechano-oxidative deterioration or degradation in the presence of molecular oxygen and mechanical forces. In contrast, aerobic biological activities combined with mechanical stimulus promote tissue regeneration and repair in various organs. A synthetic approach in which molecular oxygen and mechanical energy synergistically initiate polymerization will afford similar robustness in polymeric materials. Herein, aerobic mechanochemical reversible-deactivation radical polymerization was developed by the design of an organic mechano-labile initiator which converts oxygen into activators in response to ball milling, enabling the reaction to proceed in the air with low-energy input, operative simplicity, and the avoidance of potentially harmful organic solvents. In addition, this approach not only complements the existing methods to access well-defined polymers but also has been successfully employed for the controlled polymerization of (meth)acrylates, styrenic monomers and solid acrylamides as well as the synthesis of polymer/perovskite hybrids without solvent at room temperature which are inaccessible by other means. 
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    Free, publicly-accessible full text available December 1, 2025
  6. One area of research in multi-agent path finding is to determine how replanning can be efficiently achieved in the case of agents being delayed during execution. One option is to reschedule the passing order of agents, i.e., the sequence in which agents visit the same location. In response, we propose Switchable-Edge Search (SES), an A*-style algorithm designed to find optimal passing orders. We prove the optimality of SES and evaluate its efficiency via simulations. The best variant of SES takes less than 1 second for small- and medium-sized problems and runs up to 4 times faster than baselines for large-sized problems. 
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